Matthew "Mac" Campbell

 
  姓名:Matthew "Mac" Campbell
  職稱:Fulbright Senior Scholar
  研究室:R414
  E-mail:DrMacCampbell@gmail.com
  研究專長:Computational Biology, Phylogenetics, Population Genetics, Polyploidy, Fish Systematics

 

著作目錄

In Press

  1. Pearse DE and Campbell MA. Fly fishing for science: Ancestry and adaptation of Rainbow Trout in Yosemite National Park. Fisheries. DOI: 10.1002/fsh.10136

2018

  1. Campbell MA, Robertson DR, Vargas MI, Allen GR, and McMillan WO. Multilocus molecular systematics of the circumtropical reef-fish genus Abudefduf (Pomacentridae): history, geography and ecology of speciation. PeerJ 6:e5357. DOI: 10.7717/peerj.5357
  2. Campbell MA, Sado T, Shinzato C, Koyanagi R, Okamoto M, and Miya M. 2018. Multilocus phylogenetic analysis of the first molecular data from the rare and monotypic Amarsipidae places the family within the Pelagia and highlights limitations of existing data sets in resolving pelagian interrelationships. Molecular Phylogenetics and Evolution 124: 172-180. DOI: 10.1016/j.ympev.2018.03.008
  3. Campbell MA, Tapper BA, Simpson WR, Johnson RD, Mace W, Ram A, Lukito Y, Johnson LJ, Dupont P-Y, Scott DB, Ganley ARD, and Cox MP. 2018. Epichloë hybrida sp. nov., an emerging model system for investigating fungal allopolyploidy. Mycologia 109:715-729. DOI: 10.1080/00275514.2017.1406174

2017

  1. Campbell MA, Alfarao ME, Belasco M, and López JA. 2017. Early-branching euteleost relationships: Areas of congruence between concatenation and coalescent model inferences. PeerJ 5:e3548. DOI: 10.7717/peerj.3548
  2. Campbell MA, Nielsen JG, Sado T, Shinzato C, Kanda M, Satoh TP, and Miya M. 2017. Evolutionary affinities of the unfathomable Parabrotulidae: Molecular data indicate placement of Parabrotula within the Ophidiiformes. Molecular Phylogenetics and Evolution 109:337-342. DOI: 10.1016/j.ympev.2017.02.004

2016

  1. Campbell MA, Ganley ARD, Gabaldón T, and Cox MP. 2016. The case of the missing ancient fungal polyploids. The American Naturalist 188:602-614. DOI: 10.1086/688763

2015

  1. Campbell MA, Takebayashi N, and López JA. 2015. Beringian sub-refugia revealed in blackfish (Dallia): implications for understanding the effects of Pleistocene glaciations on Beringian taxa and other arctic aquatic fauna. BMC Evolutionary Biology 15:144. DOI: 10.1186/s12862-015-0413-2
  2. Barta J, Stone JD, Pech J, Sirova D, Adamec L, Campbell MA and Storchova H. 2015. The transcriptome of Ultricularia vulgaris, a rootless plant with minimalist genome, reveals extreme alternative splicing and only moderate sequence similarity with Ultricularia gibba. BMC Plant Biology 15:78. DOI: 10.1186/s12870-015-0467-8
  3. Duchemin W, Dupont P-Y, Campbell MA, Ganley A and Cox MP. 2015. HyLiTE: Accurate and flexible analysis of gene expression in allopolyploid species. BMC Bioinformatics 16:8. DOI: 10.1186/s12859-014-0433-8

2014

  1. Campbell MA, López JA, Satoh TP, Chen W-J, and Miya M. 2014. Mitochondrial genomic investigation of flatfish monophyly. Gene 551: 176-182. DOI: 10.1016/j.gene.2014.08.053
  2. Campbell MA, Larsen A, Collins J, and Collins M. 2014. Winterkill of Alaska blackfish (Dallia pectoralis) in methane discharging lakes of Denali National Park’s Minchumina Lake basin. Northwestern Naturalist 95:119-125. DOI: 10.1898/NWN13-27.1
  3. Campbell MA, Chen W-J, and López JA. 2014. Molecular data do not provide unambiguous support for the monophyly of flatfishes (Pleuronectiformes): a reply to Betrancur-R and Ortí. Molecular Phylogenetics and Evolution. 75: 149-153. DOI: 10.1016/j.ympev.2014.02.011
  4. Campbell MA, Sage GK, DeWilde RL, López JA, and Talbot SL. 2014. Development and characterization of 16 polymorphic microsatellite loci for the Alaska blackfish (Esociformes; Dallia pectoralis). Conservation Genetics Resources 6: 349-351. DOI: 10.1007/s12686-013-0091-6
  5. Campbell MA and López JA. 2014. Mitochondrial phylogeography of a Beringian relict: the endemic freshwater genus of blackfish Dallia (Esociformes). Journal of Fish Biology 84: 523-538. DOI: 10.1111/jfb.12314

2013

  1. Haynes TB, Campbell MA, Neilson JL and López JA. 2013. Molecular identification of seabird remains found in humpback whale feces. Marine Ornithology 41: 161-166.
  2. Campbell MA, Chen W-J, and López JA. 2013. Are flatfishes (Pleuronectiformes) monophyletic? Molecular Phylogenetics and Evolution 69: 664-673. DOI: 10.1016/j.ympev.2013.07.011
  3. Campbell MA, López JA, Sado T, and Miya M. 2013. Pike and salmon as sister taxa: Detailed intraclade resolution and divergence time estimation of Esociformes+Salmoniformes based on whole mitochondrial genome sequences. Gene 530: 57-65. DOI: 10.1016/j.gene.2013.07.068
  4. Betancur-R. R, et al. 2013. The Tree of Life and a new classification of bony fishes. PLOS Currents Tree of Life. DOIE: 10.1371/currents.tol.53ba26640df0ccaee75bb165c8c26288

2009

  1. Brodeur RD, Fleming IA, Bennett JM, and Campbell MA. 2009. Summer distribution and feeding of spiny dogfish (Squalus acanthias) off the Washington and Oregon Coasts. In, Management and Biology of Dogfish Sharks. Gallucci VF, McFarlane GA, and Bargmann GG, eds.